Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015822561.1_cds_XP_016501178.1_14939
CDS Infomation

[gene=LOC107819571] [db_xref=GeneID:107819571] [protein=metacaspase-1-like] [protein_id=XP_016501178.1] [location=join(135226..135634,138090..138420,138637..138757,138857..139063,139390..139449)] [gbkey=CDS]
Sequence

ATGGTTTGTGGCTTTTTTAATAAAATAATGATGCTTGTTAACTGTTCCAATTGCCACACA
CCTTTACAATTGCCACCGGGGGCAAAATCCATTCGCTGCGCAATCTGCCGAGCCATTACC
CTCATCGCCGATCCTCGCACTGCCCCGCCACCGCCACCACCAGCTTCCGCCTATAACAAC
CACTACTATCCTCCGGCCCCTGCCCCATCTCCTTATAATTATCACTCAACTACCAGTCAA
ACTCCCTCGCCGTCGTCACGCGGCGGCCGGAAGAGAGCTGTGATTGTCGGGATTTCGTAT
AAGAATACCCGGAATGAACTGAAAGGCTGCATCAATGATGCTAAATGTATGAGGCACTTG
CTGACTAATCGGTTCAAATTTCCTCAAGACTCCATTCTCATGCTTACTGAAGAAGAGAGG
GATCCATACAGAATTCCAACTAAACATAATATAAGAATGGCAATGTACTGGCTTGTGCAA
GGATGTCAAGCAGGGGATTCTCTGGTCTTTCATTATTCAGGTCATGGTTCACAACAAAGG
AACTACACTGGAGATGAAGTTGATGGGTTTGATGAAACACTTTGCCCTTTGGATTTTGAA
ACTCAGGGAATGATTGTTGATGATGAAATTAATGCAACACTAGTTAGGCCCCTTCCACGT
GGCGCTAAGCTTCATGCTATTATAGATGCTTGTCACAGTGGTACTATGCTAGATCTACCG
TTTCTCTGTAGGATGGACAGAACTGGACGATATGTATGGGAAGATCATCGTCCTCGATCA
GGAGCATGGAAAGGAACAAGTGGTGGAGAAGTTATATCCTTCAGTGGTTGTGATGATGAT
CAAACCTCAGCTGATACGGATAGTTTGTCCAAGGTCACTTCAACTGGTGCAATGACCTTT
TCCTTCATCCAAGCAATTGAGCATGGACAAGGAACTACATATGGGGGTATTCTAAATGCA
ATGAGATCTTCCATTCGCAGTTCTGATAGTGGTATAGGGGGTGGCATTGTCACATCTCTT
CTGACAATGCTGATTACTGGAGGAAGTGTTGGTATTGGAATGAGACAGGAGCCACAGTTA
ACAGCCAATGAGCCATTTGATGTTTACACCAAGCCATTTTCGTTATAG

Peptide Sequence

PEP ID

XP_016501178.1
PEP Infomation

PREDICTED: metacaspase-1-like [Nicotiana tabacum]
Sequence

MVCGFFNKIMMLVNCSNCHTPLQLPPGAKSIRCAICRAITLIADPRTAPPPPPPASAYNN
HYYPPAPAPSPYNYHSTTSQTPSPSSRGGRKRAVIVGISYKNTRNELKGCINDAKCMRHL
LTNRFKFPQDSILMLTEEERDPYRIPTKHNIRMAMYWLVQGCQAGDSLVFHYSGHGSQQR
NYTGDEVDGFDETLCPLDFETQGMIVDDEINATLVRPLPRGAKLHAIIDACHSGTMLDLP
FLCRMDRTGRYVWEDHRPRSGAWKGTSGGEVISFSGCDDDQTSADTDSLSKVTSTGAMTF
SFIQAIEHGQGTTYGGILNAMRSSIRSSDSGIGGGIVTSLLTMLITGGSVGIGMRQEPQL
TANEPFDVYTKPFSL

Transcript Sequence

Gene sequence data has not been registered.